Alternatives à Graphviz ?

Question

Je suis à la recherche d'alternatives à GraphViz. J'utilise GraphViz depuis plus d'une décennie et il est correct, mais les mises en page ne produisent pas de graphiques de qualité publication pour moi, compte tenu de mes données d'entrée. Parfois, mes données sont très volumineuses et complexes, et parfois non, mais GraphViz ne produit jamais de beaux graphiques.

Quels autres outils de visualisation de graphiques les gens utilisent-ils ? Idéalement, il y en a un qui utilise la syntaxe GraphViz pour le fichier d'entrée.

Voici par exemple un fichier d'entrée avec lequel je joue :

digraph mdc {    
  size="4,8";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0PAN0-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0047-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0048-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0050-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0051-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0052-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0009-FOO";    
  "KJ16:76:A2:60:6E" -> "JUNK-0413-FOO";    
  "KJ16:76:A2:60:6E" -> "JUNK-0414-FOO";    
  "KJE0:D0:13:14:94" -> "GEORGE42-FRED";    
  "KJE0:D0:13:14:94" -> "MY5-30-FRED";    
  "KJ50:04:EE:6C:F9" -> "PSPAN-036-FRED";    
  "KJ50:04:EE:6C:F9" -> "GEORGE02-FRED";    
  "KJ50:04:EE:6C:F9" -> "GEORGE04-FRED";    
  "KJ1B:B9:9B:D5:BB" -> "JUNK-0047-FOO";    
  "KJ1B:B9:9B:D5:BB" -> "JUNK-0048-FOO";    
  "KJ05:5F:EF:14:PAN" -> "thPAN-PAN-FRED";    
  "KJ05:5F:EF:14:PAN" -> "cn20-PAN-FRED";    
  "KJ15:F2-KIM-:E5YF" -> "thPAN-PAN-FRED";    
  "KJ15:F2-KIM-:E5YF" -> "cn20-PAN-FRED";    
  "KJ0E:90:D5:E6:5E" -> "JUNK-0051-FOO";    
  "KJ0E:90:D5:E6:5E" -> "JUNK-0009-FOO";    
  "KJ1E:90:DE:F1:07" -> "JUNK-0051-FOO";    
  "KJ1E:90:DE:F1:07" -> "JUNK-0009-FOO";    
  "KJ1E:90:D5:EE:5E" -> "JUNK-0051-FOO";    
  "KJ1E:90:D5:EE:5E" -> "JUNK-0047-FOO";    
  "KJ1E:90:D5:EE:5E" -> "JUNK-0009-FOO";    
  "KJ04:ED:66:C7:19" -> "JUNK-0562-FOO";    
  "KJ04:ED:66:C7:19" -> "JUNK-0561-FOO";    
  "KJ1B:B9:9C-PET-67" -> "JUNK-0047-FOO";    
  "KJ1B:B9:9C-PET-67" -> "JUNK-0049-FOO";    
  "PAN:KJ5E:7F:FF:FA" -> "JUNK-0PAN4-FOO";    
  "PAN:KJ5E:7F:FF:FA" -> "PSPAN-021-FRED";    
  "PAN:KJ5E:7F:FF:FA" -> "GEORGE38-FRED";    
  "PAN:KJ5E:7F:FF:FA" -> "JUNK-0095-FOO";    
  "PAN:KJ5E:7F:FF:FA" -> "JUNK-PAN18-FOO";    
  "KJ1B:B9:9B:D3:61" -> "JUNK-0PAN0-FOO";    
  "KJ1B:B9:9B:D3:61" -> "JUNK-0051-FOO";    
  "KJ1B:B9:9B:D3:61" -> "JUNK-0052-FOO";    
  "KJ1B:B9:9B:D3:61" -> "JUNK-0009-FOO";    
  "KJ26:18:BD:D9:E9" -> "JUNK-0562-FOO";    
  "KJ26:18:BD:D9:E9" -> "JUNK-0561-FOO";    
  "KJD0:B7:69:0A-VET" -> "cn4-06-FRED";    
  "KJD0:B7:69:0A-VET" -> "1039-FRED";    
 "KJ50:04:EE:6C:F9" [fontsize=96,shape=oval]    
 "KJ1E:90:DE:F1:07" [fontsize=96,shape=oval]    
 "KJ05:5F:EF:14:PAN" [fontsize=96,shape=oval]    
 "KJ26:18:BD:D9:E9" [fontsize=96,shape=oval]    
 "KJ1B:B9:9B:D5:BB" [fontsize=96,shape=oval]    
 "KJE0:D0:13:14:94" [fontsize=96,shape=oval]    
 "KJ0E:90:D5:E6:5E" [fontsize=96,shape=oval]    
 "KJ1E:A6:PAN:9E:3A" [fontsize=96,shape=oval]    
 "KJ1E:90:D5:EE:5E" [fontsize=96,shape=oval]    
 "PAN:KJ5E:7F:FF:FA" [fontsize=96,shape=oval]    
 "KJ1B:B9:9B:D3:61" [fontsize=96,shape=oval]    
 "KJ1B:B9:9C-PET-67" [fontsize=96,shape=oval]    
 "KJ15:F2-KIM-:E5YF" [fontsize=96,shape=oval]    
 "KJD0:B7:69:0A-VET" [fontsize=96,shape=oval]    
 "KJ04:ED:66:C7:19" [fontsize=96,shape=oval]    
 "KJ16:76:A2:60:6E" [fontsize=96,shape=oval]    
 "JUNK-0009-FOO" [fontsize=96,shape=box3d]    
 "GEORGE38-FRED" [fontsize=96,shape=box3d]    
 "JUNK-0413-FOO" [fontsize=96,shape=box3d]    
 "JUNK-0561-FOO" [fontsize=96,shape=box3d]    
 "JUNK-0050-FOO" [fontsize=96,shape=box3d]    
 "cn20-PAN-FRED" [fontsize=96,shape=box3d]    
 "JUNK-PAN18-FOO" [fontsize=96,shape=box3d]    
 "1039-FRED" [fontsize=96,shape=box3d]    
 "JUNK-0095-FOO" [fontsize=96,shape=box3d]    
 "PSPAN-021-FRED" [fontsize=96,shape=box3d]    
 "JUNK-0048-FOO" [fontsize=96,shape=box3d]    
 "JUNK-0052-FOO" [fontsize=96,shape=box3d]    
 "GEORGE42-FRED" [fontsize=96,shape=box3d]    
 "JUNK-0049-FOO" [fontsize=96,shape=box3d]    
 "GEORGE04-FRED" [fontsize=96,shape=box3d]    
 "cn4-06-FRED" [fontsize=96,shape=box3d]    
 "thPAN-PAN-FRED" [fontsize=96,shape=box3d]    
 "GEORGE02-FRED" [fontsize=96,shape=box3d]    
 "JUNK-0PAN0-FOO" [fontsize=96,shape=box3d]    
 "MY5-30-FRED" [fontsize=96,shape=box3d]    
 "JUNK-0047-FOO" [fontsize=96,shape=box3d]    
 "JUNK-0562-FOO" [fontsize=96,shape=box3d]    
 "JUNK-0PAN4-FOO" [fontsize=96,shape=box3d]    
 "JUNK-0051-FOO" [fontsize=96,shape=box3d]    
 "PSPAN-036-FRED" [fontsize=96,shape=box3d]    
 "JUNK-0414-FOO" [fontsize=96,shape=box3d]    
}    

(Tous les fontsize=96 sont ma vaine tentative d'obtenir graphviz pour rendre la police plus lisible, mais apparemment cela ne fonctionne pas).

Answer 1

Gephi est un logiciel de visualisation de graphes open source d'une qualité étonnante. Il utilise un langage de points comme GraphViz.

Answer 2

Qu'est-ce qu'il y a à ne pas aimer ?

Personnellement, je n'utiliserais pas box3d, et mon choix de couleurs vous fait probablement mal aux yeux...

(image en taille réelle : http://i.stack.imgur.com/MTe6n.png )

EDIT :

Voici le code point modifié - je l'ai réorganisé un peu :

digraph {
size="11,11";
layout=neato;
overlap=false;
splines=true;
pack=true;
start="random";
sep=0.1;

edge [len=2];
node[shape=oval,style=filled,fillcolor="#DCA80A"];

 "KJ50:04:EE:6C:F9"
 "KJ1E:90:DE:F1:07"
 "KJ05:5F:EF:14:PAN"
 "KJ26:18:BD:D9:E9"
 "KJ1B:B9:9B:D5:BB"
 "KJE0:D0:13:14:94"
 "KJ0E:90:D5:E6:5E"
 "KJ1E:A6:PAN:9E:3A"
 "KJ1E:90:D5:EE:5E"
 "PAN:KJ5E:7F:FF:FA"
 "KJ1B:B9:9B:D3:61"
 "KJ1B:B9:9C-PET-67"
 "KJ15:F2-KIM-:E5YF"
 "KJD0:B7:69:0A-VET"
 "KJ04:ED:66:C7:19"
 "KJ16:76:A2:60:6E"

node[shape=box3d,style=filled,fillcolor="#B1C3D4"];
 "JUNK-0009-FOO"
 "GEORGE38-FRED"
 "JUNK-0413-FOO"
 "JUNK-0561-FOO"
 "JUNK-0050-FOO"
 "cn20-PAN-FRED"
 "JUNK-PAN18-FOO"
 "1039-FRED"
 "JUNK-0095-FOO"
 "PSPAN-021-FRED"
 "JUNK-0048-FOO"
 "JUNK-0052-FOO"
 "GEORGE42-FRED"
 "JUNK-0049-FOO"
 "GEORGE04-FRED"
 "cn4-06-FRED"
 "thPAN-PAN-FRED"
 "GEORGE02-FRED"
 "JUNK-0PAN0-FOO"
 "MY5-30-FRED"
 "JUNK-0047-FOO"
 "JUNK-0562-FOO"
 "JUNK-0PAN4-FOO"
 "JUNK-0051-FOO"
 "PSPAN-036-FRED"
 "JUNK-0414-FOO"

  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0PAN0-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0047-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0048-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0050-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0051-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0052-FOO";    
  "KJ1E:A6:PAN:9E:3A" -> "JUNK-0009-FOO";    
  "KJ16:76:A2:60:6E" -> "JUNK-0413-FOO";    
  "KJ16:76:A2:60:6E" -> "JUNK-0414-FOO";    
  "KJE0:D0:13:14:94" -> "GEORGE42-FRED";    
  "KJE0:D0:13:14:94" -> "MY5-30-FRED";    
  "KJ50:04:EE:6C:F9" -> "PSPAN-036-FRED";    
  "KJ50:04:EE:6C:F9" -> "GEORGE02-FRED";    
  "KJ50:04:EE:6C:F9" -> "GEORGE04-FRED";    
  "KJ1B:B9:9B:D5:BB" -> "JUNK-0047-FOO";    
  "KJ1B:B9:9B:D5:BB" -> "JUNK-0048-FOO";    
  "KJ05:5F:EF:14:PAN" -> "thPAN-PAN-FRED";    
  "KJ05:5F:EF:14:PAN" -> "cn20-PAN-FRED";    
  "KJ15:F2-KIM-:E5YF" -> "thPAN-PAN-FRED";    
  "KJ15:F2-KIM-:E5YF" -> "cn20-PAN-FRED";    
  "KJ0E:90:D5:E6:5E" -> "JUNK-0051-FOO";    
  "KJ0E:90:D5:E6:5E" -> "JUNK-0009-FOO";    
  "KJ1E:90:DE:F1:07" -> "JUNK-0051-FOO";    
  "KJ1E:90:DE:F1:07" -> "JUNK-0009-FOO";    
  "KJ1E:90:D5:EE:5E" -> "JUNK-0051-FOO";    
  "KJ1E:90:D5:EE:5E" -> "JUNK-0047-FOO";    
  "KJ1E:90:D5:EE:5E" -> "JUNK-0009-FOO";    
  "KJ04:ED:66:C7:19" -> "JUNK-0562-FOO";    
  "KJ04:ED:66:C7:19" -> "JUNK-0561-FOO";    
  "KJ1B:B9:9C-PET-67" -> "JUNK-0047-FOO";    
  "KJ1B:B9:9C-PET-67" -> "JUNK-0049-FOO";    
  "PAN:KJ5E:7F:FF:FA" -> "JUNK-0PAN4-FOO";    
  "PAN:KJ5E:7F:FF:FA" -> "PSPAN-021-FRED";    
  "PAN:KJ5E:7F:FF:FA" -> "GEORGE38-FRED";    
  "PAN:KJ5E:7F:FF:FA" -> "JUNK-0095-FOO";    
  "PAN:KJ5E:7F:FF:FA" -> "JUNK-PAN18-FOO";    
  "KJ1B:B9:9B:D3:61" -> "JUNK-0PAN0-FOO";    
  "KJ1B:B9:9B:D3:61" -> "JUNK-0051-FOO";    
  "KJ1B:B9:9B:D3:61" -> "JUNK-0052-FOO";    
  "KJ1B:B9:9B:D3:61" -> "JUNK-0009-FOO";    
  "KJ26:18:BD:D9:E9" -> "JUNK-0562-FOO";    
  "KJ26:18:BD:D9:E9" -> "JUNK-0561-FOO";    
  "KJD0:B7:69:0A-VET" -> "cn4-06-FRED";    
  "KJD0:B7:69:0A-VET" -> "1039-FRED";    
}

Vous pouvez le voir et le modifier ici : http://graph.gafol.net/dLQGPHJRc - ce site utilise de jolis préréglages pour les polices et la taille des caractères.

Veuillez noter que j'ai ajouté start=random Par conséquent, la présentation peut être différente à chaque fois que vous créez le graphique.